BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB007D11LP1|AL425694
(794 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig676 1360 0.0
>3x_Contig676
Length = 2200
Score = 1360 bits (685), Expect = 0.0
Identities = 692/695 (99%)
Strand = Plus / Plus
Query: 100 gtttacattttctaatagccagctacctattgaggggtcaccatcgttgggtggtaccaa 159
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8 gtttacattttctaatagccagctacctattgaggggtcaccatcgttgggtggtaccaa 67
Query: 160 atccgatctgtttggaggactaagtgcgaacgcgaagaacgatgatgcatcaggtacgat 219
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68 atccgatctgtttggaggactaagtgcgaacgcgaagaacgatgatgcatcaggtacgat 127
Query: 220 tatgccgaagatgcctgatcaggaggcgaaaaaggctttggggcgggcttcatggaaata 279
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 tatgccgaagatgcctgatcaggaggcgaaaaaggctttggggcgggcttcatggaaata 187
Query: 280 tttccacactcttttagccagatttcccgacgagcctacagagcaagagaaaacgaaact 339
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 tttccacactcttttagccagatttcccgacgagcctacagagcaagagaaaacgaaact 247
Query: 340 acgtgaatttctttacctatatgcggagttatatccatgtggcgaatgttcttaccattt 399
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 acgtgaatttctttacctatatgcggagttatatccatgtggcgaatgttcttaccattt 307
Query: 400 cgtcaagatgttgaagaaatacccaccacaagtagccagtagaaccactgctgctttatg 459
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 cgtcaagatgttgaagaaatacccaccacaagtagccagtagaaccactgctgctttatg 367
Query: 460 gggctgtcatattcataatctagtgaacgatcatcttgaaaaaccaaggtacgattgtya 519
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 368 gggctgtcatattcataatctagtgaacgatcatcttgaaaaaccaaggtacgattgtaa 427
Query: 520 cacaatcttagaagattacgactgttgatgcactgacgagaacggtaatatcgatccatc 579
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 428 cacaatcttagaagattacgactgtggatgcactgacgagaacggtaatatcgatccatc 487
Query: 580 tttgaaaatgaacaaagtaacgttgaacaaagaggagaaacaattgggatgaagtgaggg 639
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 tttgaaaatgaacaaagtaacgttgaacaaagaggagaaacaattgggatgaagtgaggg 547
Query: 640 aatcgtttaccctccgtatgtgtcaattgaaagaataagatctaatattgttgcattcgc 699
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 aatcgtttaccctccgtatgtgtcaattgaaagaataagatctaatattgttgcattcgc 607
Query: 700 atttcgttttatctaaatatatatgtaactaataagcatagagagtatacggcagcmata 759
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 608 atttcgttttatctaaatatatatgtaactaataagcatagagagtatacggcagcaata 667
Query: 760 tttttatcatcacattatggtacaacaggcactcg 794
|||||||||||||||||||||||||||||||||||
Sbjct: 668 tttttatcatcacattatggtacaacaggcactcg 702
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5669
Number of Sequences: 1807
Number of extensions: 5669
Number of successful extensions: 36
Number of sequences better than 1.0e-20: 1
length of query: 794
length of database: 10,358,551
effective HSP length: 16
effective length of query: 778
effective length of database: 10,329,639
effective search space: 8036459142
effective search space used: 8036459142
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)